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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015855630.1_cds_XP_016512892.1_25489
CDS Infomation

[gene=LOC107829933] [db_xref=GeneID:107829933] [protein=vacuolar cation/proton exchanger 3-like] [protein_id=XP_016512892.1] [location=complement(join(1578..1621,1748..1838,2573..2689,3231..3284,3378..3494,3664..3786,4335..4556,5180..5376,5495..5523,5634..5701,6344..6601))] [gbkey=CDS]
Sequence

ATGGGTTCTCTGAGTGATTTGGAGAATGGAGAAATTAATAAAAAAGAGCAAGAATTCATC
GTCAAGAAGAATGCACAAAATTTGTCAAATTCTATGATGAGGAAAAAATCGGATCCAGAA
CTTGTATCAAGGGTTCGTTTTAAGAACCTAAGAGAAATCTTGGCTAATCTTCAAGAGGTT
ATTTTAGGAACAAAGCTTTGTTTGCTCTTTCCAGCTATCCCTTTGGCAATGCTAGCTCAA
TACTATCATTTTGCAAGACCCTGGATTTTTGCTTTTAGTTTACTTGGACTTGCACCGCTT
GCTGAACGTGTCAGCTTCTTGACTGAACAAATTGCTTACTTCACTGGTCCAACAGTTGGG
GGTCTACTAAATGCAACATGTGGCAACGCAACAGAAATGATAATAGCATTATTTGCTCTT
TACCAAAGGAAAATACATGTTCTAAAGTATTCTCTATTGGGATCTATTCTTTCCAACCTT
CTTCTTGTTCTTGGAAGCTCTCTTTTTTGTGGAGGATTGACCAACCTTAAAAAGGAACAA
AGATTTGACAGGGGACAAGCTGATGTAAACTCACTTCTCCTTCTACTGGGATTGCTTTGC
CATATGTTGCCACTGATGTATAGATTGTCTGTGGAACCAGTACTTAACAATAATGTAACA
ACTTCAGTATTGGGGTTGTCTAGAGTTAGCAGCATTTGTATGCTAGTTGCGTATGCAGCT
TATCTCTTCTTTCAACTGCGAACACACAGACAAATGTTTGAATCCTCAGAGGAGGAGGAA
GAAGATAAAGTTGCGGAAGATGAGGCGGTTATTGGGTTTTGGAGTTCATTTGCTTGGTTG
ATTGCCATGACAATTACTATTGCTGTATTATCGGAGTACGTCGTCGGTACAATCGAGGCT
GCATCAGATTCTTGGGGCATTTCAGTGAGTTTCATTAGCTTAATATTGTTGCCAATAGTG
GGAAATGCAGCAGAACATGCTGGATCCATCATCTTTGCTTTAAAGAACAAGTTGGATATA
TCTCTAGGTGTTGCCTTGGGATCAGCTTCTCAGATTTCCATGTTTGTGGTACCTGTATGT
GTCATTGTGGGTTGGATAATTGGTGTGGATATGGATTTGGATTTCAGCCTGCTTGAAACT
GGTTCTCTTGCTTTCTCAATCCTCCTCATTGCCTTCACCTTGCAGGATGGAACCTCACAT
TACATGAAAGGAGTGGTTCTATGTCTTGCCTATTGTGCCATTGCTGCCTGTTTCTTTTTT
CATAAGCTTCCCATCAATAATCATATAGGGAACAATTCATCTGGGAGCTCGGCCGCTTAA

Peptide Sequence

PEP ID

XP_016512892.1
PEP Infomation

PREDICTED: vacuolar cation/proton exchanger 3-like [Nicotiana tabacum]
Sequence

MGSLSDLENGEINKKEQEFIVKKNAQNLSNSMMRKKSDPELVSRVRFKNLREILANLQEV
ILGTKLCLLFPAIPLAMLAQYYHFARPWIFAFSLLGLAPLAERVSFLTEQIAYFTGPTVG
GLLNATCGNATEMIIALFALYQRKIHVLKYSLLGSILSNLLLVLGSSLFCGGLTNLKKEQ
RFDRGQADVNSLLLLLGLLCHMLPLMYRLSVEPVLNNNVTTSVLGLSRVSSICMLVAYAA
YLFFQLRTHRQMFESSEEEEEDKVAEDEAVIGFWSSFAWLIAMTITIAVLSEYVVGTIEA
ASDSWGISVSFISLILLPIVGNAAEHAGSIIFALKNKLDISLGVALGSASQISMFVVPVC
VIVGWIIGVDMDLDFSLLETGSLAFSILLIAFTLQDGTSHYMKGVVLCLAYCAIAACFFF
HKLPINNHIGNNSSGSSAA

Transcript Sequence

Gene sequence data has not been registered.